The Cancer Cell Line Encyclopedia Enables Predictive

Cellminercdb For Integrative Cross Database Genomics And Pharmacogenomics Analyses Of Cancer Cell Lines Sciencedirect

Such efforts should be greatly aided by robust preclinical model systems that reflect the genomic diversity of human cancers and for which detailed genetic and pharma.

The cancer cell line encyclopedia enables predictive. The cancer cell line encyclopedia enables predictive modelling of anticancer drug sensitivity. Here we describe the cancer cell line encyclopedia ccle. 1 2 3 na1 naff9. When coupled with pharmacological profiles for 24 anticancer drugs across 479 of the cell lines this collection allowed identification of genetic lineage and gene expression based predictors of drug sensitivity.

A compilation of gene expression chromosomal copy number and massively parallel sequencing data from 947 human cancer cell lines. Pdf the cancer cell line encyclopedia enables predictive modelling of anticancer drug sensitivity giordano caponigro m. 2020 the broad institute of mit harvard. This site needs javascript to work properly.

The cancer cell line encyclopedia enables predictive modelling of anticancer drug sensitivity. The cancer cell line encyclopedia enables predictive modelling of anticancer drug sensitivity. Jordi barretina the broad institute of harvard and mit cambridge massachusetts 02142 usa. The cancer cell line encyclopedia enables predictive modelling of anticancer drug sensitivity.

The cancer cell line encyclopedia enables predictive modelling of anticancer drug sensitivity. The ccle cancer cell line encyclopedia project is a collaboration between the broad institute and the novartis institutes for biomedical research and its genomics institute of the novartis research foundation to conduct a detailed genetic and pharmacologic characterization of a large panel of human cancer models to develop integrated computational analyses that link distinct pharmacologic vulnerabilities to genomic patterns and to translate cell line integrative genomics into cancer. Nicolas stransky 1 na1. Please enable it to take advantage of the complete set of features.

A compilation of gene expression chromosomal copy number and massively parallel sequencing data from 947 human cancer cell lines. Liu and jordi barretina academia edu the systematic translation of cancer genomic data into knowledge of tumour biology and therapeutic possibilities remains challenging.

The Cancer Cell Line Encyclopedia Enables Predictive Modelling Of Anticancer Drug Sensitivity Nature

The Cancer Cell Line Encyclopedia Enables Predictive Modelling Of Anticancer Drug Sensitivity Nature

Broad Institute Cancer Cell Line Encyclopedia Ccle

Broad Institute Cancer Cell Line Encyclopedia Ccle

Depmap The Cancer Dependency Map Project At Broad Institute

Depmap The Cancer Dependency Map Project At Broad Institute

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Https Www Cell Com Cell Pdf S0092 8674 19 31385 6 Pdf

Next Generation Characterization Of The Cancer Cell Line Encyclopedia Request Pdf

Next Generation Characterization Of The Cancer Cell Line Encyclopedia Request Pdf

Cellminercdb For Integrative Cross Database Genomics And Pharmacogenomics Analyses Of Cancer Cell Lines Sciencedirect

Cellminercdb For Integrative Cross Database Genomics And Pharmacogenomics Analyses Of Cancer Cell Lines Sciencedirect

Cancers Free Full Text Cancer Cell Lines Are Useful Model Systems For Medical Research Html

Cancers Free Full Text Cancer Cell Lines Are Useful Model Systems For Medical Research Html

New Insight For Pharmacogenomics Studies From The Transcriptional Analysis Of Two Large Scale Cancer Cell Line Panels Scientific Reports

New Insight For Pharmacogenomics Studies From The Transcriptional Analysis Of Two Large Scale Cancer Cell Line Panels Scientific Reports

A Guide To The Quantitative Proteomic Profiles Of The Cancer Cell Line Encyclopedia Biorxiv

A Guide To The Quantitative Proteomic Profiles Of The Cancer Cell Line Encyclopedia Biorxiv

Network Based Analysis Of Prostate Cancer Cell Lines Reveals Novel Marker Gene Candidates Associated With Radioresistance And Patient Relapse

Network Based Analysis Of Prostate Cancer Cell Lines Reveals Novel Marker Gene Candidates Associated With Radioresistance And Patient Relapse

Integrative Analysis Of The Cancer Genome Atlas And Cancer Cell Lines Encyclopedia Large Scale Genomic Databases Muc4 Muc16 Muc20 Signature Is Associated With Poor Survival In Human Carcinomas Springerlink

Integrative Analysis Of The Cancer Genome Atlas And Cancer Cell Lines Encyclopedia Large Scale Genomic Databases Muc4 Muc16 Muc20 Signature Is Associated With Poor Survival In Human Carcinomas Springerlink

Predicting Ligand Dependent Tumors From Multi Dimensional Signaling Features Biorxiv

Predicting Ligand Dependent Tumors From Multi Dimensional Signaling Features Biorxiv

Predicting Cancer Drug Response Using A Recommender System Biorxiv

Predicting Cancer Drug Response Using A Recommender System Biorxiv

High Resolution Mapping Of Cancer Cell Networks Using Co Functional Interactions Biorxiv

High Resolution Mapping Of Cancer Cell Networks Using Co Functional Interactions Biorxiv

Nonlinear Mixed Effects Models For Modeling In Vitro Drug Response Data To Determine Problematic Cancer Cell Lines Scientific Reports

Nonlinear Mixed Effects Models For Modeling In Vitro Drug Response Data To Determine Problematic Cancer Cell Lines Scientific Reports

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Https Www Biorxiv Org Content 10 1101 166199v1 Full Pdf

How To Find The Right Drug For Each Patient Advances And Challenges In Pharmacogenomics Sciencedirect

How To Find The Right Drug For Each Patient Advances And Challenges In Pharmacogenomics Sciencedirect

A Systematic Study On Drug Response Associated Genes Using Baseline Gene Expressions Of The Cancer Cell Line Encyclopedia Scientific Reports

A Systematic Study On Drug Response Associated Genes Using Baseline Gene Expressions Of The Cancer Cell Line Encyclopedia Scientific Reports

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Https Www Cell Com Developmental Cell Pdfextended S1534 5807 19 30582 9

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Https Www Cell Com Cell Reports Pdfextended S2211 1247 18 30389 9

Lineage Specific Core Regulatory Circuits Determine Gene Essentiality In Cancer Cells Biorxiv

Lineage Specific Core Regulatory Circuits Determine Gene Essentiality In Cancer Cells Biorxiv

Cancers Free Full Text Developing A Prognostic Gene Panel Of Epithelial Ovarian Cancer Patients By A Machine Learning Model Html

Cancers Free Full Text Developing A Prognostic Gene Panel Of Epithelial Ovarian Cancer Patients By A Machine Learning Model Html

Drug Sensitivity In Cancer Cell Lines Is Not Tissue Specific Springerlink

Drug Sensitivity In Cancer Cell Lines Is Not Tissue Specific Springerlink

Cancers Free Full Text Liver Cancer Cell Lines Treated With Doxorubicin Under Normoxia And Hypoxia Cell Viability And Oncologic Protein Profile Html

Cancers Free Full Text Liver Cancer Cell Lines Treated With Doxorubicin Under Normoxia And Hypoxia Cell Viability And Oncologic Protein Profile Html

Yap Regulates Glucose Utilization And Sustains Nucleotide Synthesis To Enable Organ Growth Biorxiv

Yap Regulates Glucose Utilization And Sustains Nucleotide Synthesis To Enable Organ Growth Biorxiv

Https Onlinelibrary Wiley Com Doi Pdf 10 1002 Ijc 31998

Https Onlinelibrary Wiley Com Doi Pdf 10 1002 Ijc 31998

A Resource For Cell Line Authentication Annotation And Quality Control Nature

A Resource For Cell Line Authentication Annotation And Quality Control Nature

Comprehensive Comparison Of Molecular Portraits Between Cell Lines And Tumors In Breast Cancer Springerlink

Comprehensive Comparison Of Molecular Portraits Between Cell Lines And Tumors In Breast Cancer Springerlink

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Https Dash Harvard Edu Bitstream 1 41899268 1 Nihms 1033364 Pdf

Origin Of The U87mg Glioma Cell Line Good News And Bad News Science Translational Medicine

Origin Of The U87mg Glioma Cell Line Good News And Bad News Science Translational Medicine

Generating Single Cell Derived Knockout Clones In Mammalian Cells With Crispr Cas9 Giuliano 2019 Current Protocols In Molecular Biology Wiley Online Library

Generating Single Cell Derived Knockout Clones In Mammalian Cells With Crispr Cas9 Giuliano 2019 Current Protocols In Molecular Biology Wiley Online Library

Biological Network Topology Features Predict Gene Dependencies In Cancer Cell Lines Biorxiv

Biological Network Topology Features Predict Gene Dependencies In Cancer Cell Lines Biorxiv

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Https D Nb Info 1179064097 34

Https Hal Pasteur Archives Ouvertes Fr Pasteur 01300940 Document

Https Hal Pasteur Archives Ouvertes Fr Pasteur 01300940 Document

Reversal Of Cancer Gene Expression Correlates With Drug Efficacy And Reveals Therapeutic Targets Nature Communications

Reversal Of Cancer Gene Expression Correlates With Drug Efficacy And Reveals Therapeutic Targets Nature Communications

Machine Learning And Data Mining Frameworks For Predicting Drug Response In Cancer An Overview And A Novel In Silico Screening Process Based On Association Rule Mining Sciencedirect

Machine Learning And Data Mining Frameworks For Predicting Drug Response In Cancer An Overview And A Novel In Silico Screening Process Based On Association Rule Mining Sciencedirect

Clustergrammer A Web Based Heatmap Visualization And Analysis Tool For High Dimensional Biological Data Abstract Europe Pmc

Clustergrammer A Web Based Heatmap Visualization And Analysis Tool For High Dimensional Biological Data Abstract Europe Pmc

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Https Www Cell Com Cell Chemical Biology Pdf S2451 9456 17 30225 8 Pdf

Ndrg1 Regulates Neutral Lipid Metabolism In Breast Cancer Cells Springerlink

Ndrg1 Regulates Neutral Lipid Metabolism In Breast Cancer Cells Springerlink

Rna Sequencing Based Cell Proliferation Analysis Across 19 Cancers Identifies A Subset Of Proliferation Informative Cancers With A Common Survival Signature Biorxiv

Rna Sequencing Based Cell Proliferation Analysis Across 19 Cancers Identifies A Subset Of Proliferation Informative Cancers With A Common Survival Signature Biorxiv

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Https Www Biorxiv Org Content 10 1101 2020 02 03 932384v1 Full Pdf

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Https Www Biorxiv Org Content 10 1101 546481v1 Full Pdf

Molecular Characterization Of Breast Cancer Cell Lines Through Multiple Omic Approaches Springerlink

Molecular Characterization Of Breast Cancer Cell Lines Through Multiple Omic Approaches Springerlink

Chemogenetic Interactions In Human Cancer Cells Sciencedirect

Chemogenetic Interactions In Human Cancer Cells Sciencedirect

Iorio Francesco Wellcome Sanger Institute

Iorio Francesco Wellcome Sanger Institute

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Https Www Cell Com Molecular Therapy Family Nucleic Acids Pdfextended S2162 2531 18 30255 5

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Http Www Biorxiv Org Content Early 2017 07 20 166223 Full Pdf

Cells Free Full Text Patient Derived Xenograft Models Of Breast Cancer And Their Application Html

Cells Free Full Text Patient Derived Xenograft Models Of Breast Cancer And Their Application Html

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Https Cancerimmunolres Aacrjournals Org Content 5 4 319 Full Text Pdf

Aspartate Is A Limiting Metabolite For Cancer Cell Proliferation Under Hypoxia And In Tumours Nature Cell Biology

Aspartate Is A Limiting Metabolite For Cancer Cell Proliferation Under Hypoxia And In Tumours Nature Cell Biology

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